Description Usage Arguments Examples
View source: R/nmf.responsible.genes.R
This function allows you to find the likely genes responsible for affecting a variable, typically the presence or absence of a disease
1 2 | nmf.responsible.genes(H.matrix, W.matrix, variable, number.genes, gene.names,
gene.expressions, control.age = T, age = NA)
|
H.matrix |
The H.matrix of an NMF factorisation of a gene expression dataset |
W.matrix |
The W.matrix of an NMF factorisation of a gene expression dataset |
variable |
The discrete variable or disease to be investigated |
number.genes |
The number of likely genes to find |
gene.names |
A character/string vector containing the list of gene names |
gene.expressions |
The initial gene expression matrix, with genes labelled by row names |
1 |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.