Description Usage Arguments Examples
View source: R/nmf.gene.choose.k.R
This function allows you to find the likely genes responsible for affecting a variable, typically the presence or absence of a disease
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k.range |
Suggest a vector of k values to explore, with a default |
zero.threshold |
what proportion of zeros should a gene have before being left out of the analysis |
number.genes |
The number of likely genes to find |
variable |
The discrete variable or disease to be investigated |
gene.names |
A character/string vector containing the list of gene names |
gene.expressions |
The initial gene expression matrix, with genes labelled by row names |
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