CalculateBootCI: Calculate column-wise confidence intervals from a numeric...

In ATpoint/vizzy: vizzy - functions for data visualization

Calculate column-wise confidence intervals from a numeric matrix

Description

Function to calculate confidence interval from a numeric matrix on a column-wise basis. Code is adapted and basically identical to the Utilities.R script from the Bioconductor package ChIPSeeker. Main intend is to serve as helper function for the PlotProfiles() function.

Usage

CalculateBootCI(cts, Times = 500, Cores = 1, CI = 0.95)

Arguments

cts	a count matrix
Times	number of resamplings
Cores	numbers of mclapply workers
CI	the confidence interval, default is 95%

Author(s)

Alexander Toenges

Examples

cts <- sapply(seq(1,100), function(x) rnorm(100, 1))
ci <- CalculateBootCI(cts = cts, Times = 500, Cores = 8, CI = 0.95)

ATpoint/vizzy documentation built on Dec. 15, 2022, 5:01 p.m.