Files in AbbVie-ComputationalGenomics/POEMColoc
Implement POEM colocalization method
DESCRIPTION
LICENSE
NAMESPACE
R/MAF_filter.R
R/POEMColoc.R
R/POEMColoc_dev.R
R/POEMColoc_from_config.R
R/R2_MAF_check_dataset.R
R/add_R2_from_R2_MAF_check.R
R/add_R2_from_gds.R
R/add_R2_to_dataset_list.R
R/add_R2_to_dataset_list_function_input_only.R
R/add_metadata.R
R/check_datasets.R
R/check_input_condition.R
R/check_zero_pvalues.R
R/compute_R2_from_geno_df.R
R/dataset_filter.R
R/detect_imputation_class.R
R/detect_list_condition.R
R/empty_dataset_check.R
R/format_POEMColoc_input.R
R/format_priors.R
R/getSNP.R
R/get_dosage.R
R/get_dosage_alt.R
R/get_imputed_dosage.R
R/get_start_and_end_pos.R
R/imputed_coloc_input.R
R/position_filter.R
R/single_dataset_check.R
README.md
data/MAF.rda
data/R2.rda
data/eQTL_stats.rda
data/gwas_stats.rda
inst/extdata/example.gds
inst/extdata/example2.gds
inst/extdata/subset.ped
inst/extdata/subset2.ped
man/MAF.Rd
man/MAF_filter.Rd
man/POEMColoc.Rd
man/POEMColoc_dev.Rd
man/POEMColoc_from_config.Rd
man/R2.Rd
man/R2_MAF_check_dataset.Rd
man/add_R2_from_R2_MAF_check.Rd
man/add_R2_from_gds.Rd
man/add_R2_to_dataset_list.Rd
man/add_R2_to_dataset_list_function_input_only.Rd
man/add_metadata.Rd
man/check_datasets.Rd
man/check_input_condition.Rd
man/check_zero_pvalues.Rd
man/compute_R2_MAF_from_geno_df.Rd
man/dataset_filter.Rd
man/detect_imputation_class.Rd
man/detect_list_condition.Rd
man/eQTL_stats.Rd
man/empty_dataset_check.Rd
man/format_POEMColoc_input.Rd
man/format_priors.Rd
man/getSNP.Rd
man/get_dosage.Rd
man/get_dosage_alt.Rd
man/get_imputed_dosage.Rd
man/get_start_and_end_pos.Rd
man/gwas_stats.Rd
man/imputed_coloc_input.Rd
man/position_filter.Rd
man/single_dataset_check.Rd
