R/get_dosage_alt.R

In AbbVie-ComputationalGenomics/POEMColoc: Implement POEM colocalization method

#' wrapper for seqGetData
#'
#' @param gds 
#' gds file connection
#' @return
#' matrix with rows corresponding to samples and columns to positions
#'
#' @examples
get_dosage_alt <- function(gds) {
  genotype = seqGetData(gds, "$dosage_alt")
  return(genotype)
}