plotPRPS: RUV-III PRPS Map

In AbhishekSinha28/tgcapkg: TGCA Data Analysis

RUV-III PRPS Map

Description

This function is a part of the data analysis functionality of tcgaCleaneR. It helps to map the pseudo samples for different biology in a cancer type replicated across batches. The replication of of pseudo samples across batches are known as Pseudo Replicates.

Usage

plotPRPS(data, n = 3)

Arguments

data	S4 data object
n	numeric: Minimum no. of samples needed to make pseudo sample. By default it consider 3 samples.

Value

PRPS Map which can be used to show how the biological variation are distributed across batches.

Examples

## Not run: 
plotPRPS(data = brca.data)

## End(Not run)

AbhishekSinha28/tgcapkg documentation built on May 3, 2022, 7:40 a.m.