GetIMPath: Quick image name finding

Description Usage Arguments Value Author(s) See Also Examples

View source: R/GetIMPath.R

Description

Get MX image name(s) given its coordinates

Usage

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GetIMPath(SERVER = "MDCStore", ID = "moldev", PWD = "moldev", PlateID,
  WellID, SiteID, TimePoint = 1, pst = "\\", Unix.diff = c("//",
  "/media/"))

Arguments

SERVER

the odbc connexion to MDCStore database

ID

the identifiant for connexion

PWD

the password for connexion

PlateID

the Plate Identifier

WellID

the Well Identifier

SiteID

a vector of 2 integers showing x and y site positions. If only one site present, x and y equal 0

TimePoint

From what timepoint the image name should be returned. Default is 1.

pst

collapsing pattern. Default is '\'. Empty ” can be needed in some cases.

Unix.diff

the string replacement for the mounting point of UNC image location, when accessed from linux machine

Value

A string array containing full image names

Author(s)

Allan Sauvat, [email protected]

See Also

GetMDCInfo

Examples

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#Not running
DB = GetMDCInfo(SERVER = 'MDCStore',ID = 'sa', PWD = '***') 
UniqueIDs=DB$MeasurementID[grep(paste0(1500:1515,collapse='|'),DB$PlateID)]) #Get uniquesIDs from plate 1500 to 1515
MyData = lapply(UniqueIDs,function(x)GetMDCData(SERVER='YODA-SERVER',MeasurementID=x)) #Create a list that contains cellular data from each plate

Ahlallan/MetaxpR documentation built on Aug. 11, 2018, 7:59 a.m.