GetIMPath: Quick image name finding

Description Usage Arguments Value Author(s) See Also Examples

View source: R/GetIMPath.R

Description

Get MX image name(s) given its coordinates

Usage

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GetIMPath(SERVER = "MDCStore", ID = "moldev", PWD = "moldev", PlateID,
  WellID, SiteID, TimePoint = 1, Unix.diff = c("//", "/media/"))

Arguments

SERVER

the odbc connexion to MDCStore database

ID

the identifiant for connexion

PWD

the password for connexion

PlateID

the Plate Identifier

WellID

the Well Identifier

SiteID

a vector of 2 integers showing x and y site positions. If only one site present, x and y equal 0

TimePoint

From what timepoint the image name should be returned. Default is 1.

Unix.diff

the string replacement for the mounting point of UNC image location, when accessed from linux machine

Value

A string array containing full image names

Author(s)

Allan Sauvat, [email protected]

See Also

GetMDCInfo

Examples

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#Not running
DB = GetMDCInfo(SERVER = 'MDCStore',ID = 'sa', PWD = '***') 
UniqueIDs=DB$MeasurementID[grep(paste0(1500:1515,collapse='|'),DB$PlateID)]) #Get uniquesIDs from plate 1500 to 1515
MyData = lapply(UniqueIDs,function(x)GetMDCData(SERVER='YODA-SERVER',MeasurementID=x)) #Create a list that contains cellular data from each plate

Ahlallan/MetaxpR documentation built on April 20, 2018, 12:11 p.m.