wb_get_transcriptome_path: Get path to cached transcriptome file
In AlexWeinreb/wbData: Download And Use WormBase Data
View source: R/load_transcriptome.R
wb_get_transcriptome_path R Documentation
Get path to cached transcriptome file
Description
Returns the path to a transcripts FASTA file in the cache. Useful to use with functions that require
a connection to read from, or to pass to other packages. The file gets
downloaded as necessary.
Usage
wb_get_transcriptome_path(WS, dir_cache = NULL)
Arguments
WS
Wormbase release version.
dir_cache
Directory where the downloaded files are cached.
Value
a character string pointing to a "c_elegans.PRJNA13758.WSxxx.mRNA_transcripts.fa.gz" file.
AlexWeinreb/wbData documentation built on April 3, 2025, 1:24 p.m.
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View source: R/load_transcriptome.R
| wb_get_transcriptome_path | R Documentation |
Get path to cached transcriptome file
Description
Returns the path to a transcripts FASTA file in the cache. Useful to use with functions that require a connection to read from, or to pass to other packages. The file gets downloaded as necessary.
Usage
wb_get_transcriptome_path(WS, dir_cache = NULL)
Arguments
WS |
Wormbase release version. |
dir_cache |
Directory where the downloaded files are cached. |
Value
a character string pointing to a "c_elegans.PRJNA13758.WSxxx.mRNA_transcripts.fa.gz" file.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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