get_n_significant_conditions: Count number of conditions each effect is significant in
In Alice-MacQueen/snpdiver: Explore SNP Effects on Multiple Phenotypes in Diversity Panels

Count number of conditions each effect is significant in

get_n_significant_conditions(
  m,
  thresh = 0.05,
  conditions = NULL,
  sig_fn = get_lfsr
)

`m`	the mash result (from joint or 1by1 analysis)
`thresh`	indicates the threshold below which to call signals significant
`conditions`	which conditions to include in check (default to all)
`sig_fn`	the significance function used to extract significance from mash object; eg could be ashr::get_lfsr or ashr::get_lfdr

a vector containing the number of significant conditions

Alice-MacQueen/snpdiver documentation built on Dec. 17, 2021, 8:41 a.m.

Alice-MacQueen/snpdiver index

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