Man pages for AlineTalhouk/FluidigmValidation
VALIDATE FLUIDIGM MACHINE DATA

checkAllFiles	Title function to check if files in user-input directory are...
checkFC	Title function to check FC
filterPassDepth	Title function to subset data that has passed filter and...
filterQualityFrequency	Title function to filter quality and frequency for...
fluidigmValidationMain	Title main function for processing fluidigm data files
getPatientID	Title function to obtain patient ID from file name
labelMutationGroup	Title function for labelling mutation group
labelTumorType	Title function to label tumor type based on file name
notMutationGroupException	Title function to check if a chunk is an mutation group...
onceN	Title function to check if a vector only has 1 "N"
onceT1	Title function to check if a vector has only 1 T1
onceT2	Title function to check if a vector has only 1 T2
onlyRepetitivePos	Title function for finding only data rows whose positions are...
organize	Title function to create a folder for each patient and move...
passSummary	Title function to summarize raw genome files by taking only...
processAmpliconInfo	Title function to perform amplicon information
renameToTxt	Title function to rename vcf files to txt files in not using...
splitINFO	Title function to split INFO column in fluidigm data
twiceT1	Title function to check if a vector has only 2 T1
twiceT2	Title function to check if a vector has only 2 T2