cleanup_taxons: Clean up taxons by removing structures no longer present...
In AllenInstitute/cocoframer: COmmon COordinate FRAMEwork in R
Description
Usage
Arguments
Value
Description
Clean up taxons by removing structures no longer present after filtering
Usage
1
2
cleanup_taxons(flat_ontology, id_column = "id",
taxon_column = "taxons")
Arguments
flat_ontology
A flat ontology data.frame generated by flatten_mba_ontology.
id_column
The id column used to link structures. default is "id".
taxon_column
The name of the column with taxons generated by generate_taxons().
Value
a data.frame with a modified taxons column that lacks any ids that are no
longer present in the ontology.
AllenInstitute/cocoframer documentation built on May 21, 2020, 3:09 a.m.
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Description Usage Arguments Value
Description
Clean up taxons by removing structures no longer present after filtering
Usage
1 2 | cleanup_taxons(flat_ontology, id_column = "id",
taxon_column = "taxons")
|
Arguments
flat_ontology |
A flat ontology data.frame generated by flatten_mba_ontology. |
id_column |
The id column used to link structures. default is "id". |
taxon_column |
The name of the column with taxons generated by generate_taxons(). |
Value
a data.frame with a modified taxons column that lacks any ids that are no longer present in the ontology.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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