install_scrattch: Install all packages in the scrattch suite

View source: R/install.R

install_scrattchR Documentation

Install all packages in the scrattch suite

Description

Install all packages in the scrattch suite

Usage

install_scrattch(packages = NULL)

Arguments

packages

A character vector of scrattch packages. If NULL (default), installs all packages. Available packages are:

  • "scrattch.io": File handling for RNA-seq data storage formats.

  • "scrattch.hicat": Hierarchical, iterative clustering for analysis of transcriptomics.

  • "scrattch.vis": Data visualization for RNA-seq analysis results.

  • "tasic2016data": Data and annotations from Tasic, et al., Nature Neuroscience (2016). Used for demonstrations and testing.


AllenInstitute/scrattch documentation built on March 6, 2025, 2:09 a.m.