Description Usage Arguments Value Examples
query_vcf
enables you to query variants within a VCF
1 2 |
... |
Gene names, regions, or wormbase identifiers to query. |
info |
Info columns to output. If an |
format |
Format columns to output. A
|
impact |
A vector of impact levels to filter on (LOW, MODERATE, HIGH, MODIFIER). "ALL" can be used to return ALL variants. [Default |
samples |
A set of samples to subset on [default: |
long |
Return dataset in long or wide format. [Default |
vcf |
Use a custom VCF. |
Dataframe with variant data
1 | query_vcf("pot-2","II:1-10000","WBGene00010785")
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