Man pages for AndrewC160/ROMOPOmics
ROMOPOmics: incorporating 'Omics Data Into The Observational Medical Outcomes Partnership (OMOP) Data Model
| buildSQLDBR | buildSQLDBR |
| check_geo_by_url | check_geo_by_url |
| combineInputTables | combineInputTables |
| composite_geo_table | composite_geo_table |
| expand_and_tpose | expand_and_tpose |
| expand_entry_columns | expand_entry_columns |
| fetch_geo_datasets | fetch_geo_datasets |
| fetch_geo_series | fetch_geo_series |
| getDBTables | getDBTables |
| getDependencies | getDependencies |
| interpret_class | interpret_class |
| load_data_dir | load_mask_dir |
| loadDataModel | Upload a common data model |
| load_mask_dir | Load then read mask files from a directory |
| loadModelMasks | Load the data dictionary for corresponding data fields to the... |
| metadata_mask | metadata_mask |
| parse_gds_coldata | parse_gds_coldata |
| parse_geo_metadata | parse_geo_metadata |
| parse_geo_text_results | parse_geo_text_results |
| parse_gse_metadata | parse_gse_metadata |
| parse_metadata | parse_metadata |
| read_data | read_mask |
| readInputFile | Convert input data to OMOP formated data via CDM and mask |
| read_mask | Read a mask file |
| transpose_to_colwise | switch columns and rows of (transpose) data table |
| truncate_by_chars | truncate_by_chars |
