tx_add_exonPlace: Add exon place

View source: R/tx_core.R

tx_add_exonPlaceR Documentation

Add exon place

Description

Adds a column specifying if the exon is the first, intermediate, or last exon

Usage

tx_add_exonPlace(txDT, geneAnnot, nCores = 1)

Arguments

txDT

data.table. A table as output by the tx_makeDT_coverage(), tx_makeDT_nucFreq() or tx_makeDT_covNucFreq() functions.

geneAnnot

GRanges. Gene annotation as loaded by tx_load_bed().

nCores

integer. Number of cores to run the function with. Multicore capability is not available in Windows OS.

Value

data.table


AngelCampos/tx_tools documentation built on Sept. 17, 2024, 1:27 a.m.