argo_qc_censor_if_not: Apply QC flags to Argo data

In ArgoCanada/argodata: Locate, Download, and Read Argo Ocean Float Data

Description

Apply QC flags to Argo data

Usage

argo_qc_censor_if_not(
  tbl,
  cols,
  qc_flag,
  qc_cols = argo_qc_cols(tbl, {     {         cols     } })
)

argo_qc_censor_if(
  tbl,
  cols,
  qc_flag,
  qc_cols = argo_qc_cols(tbl, {     {         cols     } })
)

argo_qc_keep_if_all(
  tbl,
  cols,
  qc_flag,
  qc_cols = argo_qc_cols(tbl, {     {         cols     } })
)

argo_qc_keep_if_any(
  tbl,
  cols,
  qc_flag,
  qc_cols = argo_qc_cols(tbl, {     {         cols     } })
)

argo_qc_discard_if_all(
  tbl,
  cols,
  qc_flag,
  qc_cols = argo_qc_cols(tbl, {     {         cols     } })
)

argo_qc_discard_if_any(
  tbl,
  cols,
  qc_flag,
  qc_cols = argo_qc_cols(tbl, {     {         cols     } })
)

argo_qc_cols(tbl, cols)

Arguments

tbl	A data frame containing _qc or _QC columns.
cols	Columns in tbl, specified using dplyr::select() syntax.
qc_flag	One or more quality control flags. See argo_reference_qc_flag for long-form descriptions of integer qc_flag values.
qc_cols	A vector of columns that contain the quality control flag values found in columns.

Value

A modified tbl.

Examples

library(dplyr, warn.conflicts = FALSE)

with_argo_example_cache({
  argo_prof_levels("dac/csio/2902746/profiles/BR2902746_001.nc") %>%
    argo_qc_censor_if_not(doxy, qc_flag = c(1, 2, 8))
})

ArgoCanada/argodata documentation built on Dec. 13, 2021, 10:13 a.m.