Man pages for ArnaudDroitLab/ENCODExplorerData
A compilation of ENCODE metadata

build_file_db_from_raw_tablesExtract file metadata from the full set of ENCODE metadata...
clean_columnClean a single column of the data.frame
clean_tableClean a data.frame that was produced by...
encode_df_fullENCODE file metadata, Full version
encode_df_liteENCODE file metadata, Light version
ENCODExplorerDataENCODExplorerData
fetch_and_clean_raw_ENCODE_tablesFetches and preprocess the raw metadata tables from ENCODE.
fetch_table_from_ENCODE_RESTExtract a data.frame corresponding to a table in ENCODE...
generate_encode_df_fullGiven the raw ENCODE tables, this generate a data.table with...
generate_encode_df_liteExtract file metadata from the full set of ENCODE metadata...
get_encode_typesA list of known tables from ENCODE database.
get_schemasExtract the schemas from ENCODE's github
get_schema_urlsReturns the URLs for downloading the XML schemas from...
ArnaudDroitLab/ENCODExplorerData documentation built on Oct. 19, 2019, 2:12 p.m.