Files in ArnaudDroitLab/GenomicOperations
GenomicOperations
DESCRIPTION
NAMESPACE
R/GenomicEnrichment.R
R/GenomicOverlaps.R
R/operations.R
R/plots.R
inst/extData/enrichment_test_1.bed
inst/extData/enrichment_test_2.bed
inst/extData/partition.bed
inst/unitTests/test_GenomicEnrichment.R
inst/unitTests/test_GenomicOverlap.R
man/GenomicEnrichment-class.Rd
man/GenomicEnrichment.Rd
man/GenomicOverlaps-class.Rd
man/GenomicOverlaps.Rd
man/collapse_regions.Rd
man/combined_regions-GenomicOverlaps-method.Rd
man/combined_regions-set-GenomicOverlaps-GRanges-method.Rd
man/consensus_indices.Rd
man/consensus_regions.Rd
man/coverage_df.Rd
man/coverage_plot.Rd
man/enrichment_df.Rd
man/enrichment_plot.Rd
man/initial_regions-GenomicOverlaps-method.Rd
man/intersect_indices.Rd
man/intersect_matrix.Rd
man/intersect_regions.Rd
man/length-GenomicEnrichment-method.Rd
man/length-GenomicOverlaps-method.Rd
man/names-GenomicEnrichment-method.Rd
man/names-GenomicOverlaps-method.Rd
man/names-set-GenomicEnrichment-character-method.Rd
man/names-set-GenomicOverlaps-character-method.Rd
man/pairwise_overlap.Rd
man/plot_venn.Rd
man/project_ranges.Rd
man/proportion_df.Rd
man/proportion_plot.Rd
man/single_region_enrichment.Rd
man/union_indices.Rd
man/union_regions.Rd
tests/runTests.R
