View source: R/nucleoSimFunctions.R
plot.syntheticNucMap | R Documentation |
Generate a graph for
a list marked as an syntheticNucMap
class
## S3 method for class 'syntheticNucMap' plot(x, ...)
x |
a list marked as an |
... |
|
a graph of a synthetic nucleosome map
Astrid Deschenes, Rawane Samb
## Generate a synthetic map with 20 well-positioned nucleosomes, 5 fuzzy ## nucleosomes and 10 deleted nucleosomes using a Student distribution ## with a variance of 10 for the well-positioned nucleosomes, ## a variance of 20 for the fuzzy nucleosomes and a seed of 15 syntheticMap <- syntheticNucMapFromDist(wp.num = 30, wp.del = 10, wp.var = 10, fuz.num = 5, fuz.var = 20, rnd.seed = 15, distr = "Student") ## Create graph using the synthetic map plot(syntheticMap, xlab="Position", ylab="Coverage")
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