Man pages for AustralianAntarcticDivision/tagsim
Simple population model for tag-based simulations
| adjacted_move | Create adjacent movement matrix |
| baranov | Baranov catch equation |
| baranov_catch | Baranov catch equation |
| bootstrap | Bootstrap method for single release tag-return studies |
| calc_catch | Calculate catch |
| catch_to_F | Calculate F for a given catch |
| check_control | Check control file |
| create_control | Create a control file |
| create_control_hcr | Create a simplified control file for a single-area population... |
| create_model | Create a model object |
| create_model_hcr | Create a simplified model object for a single-area population... |
| create_model_multi_release | Create a multiple release model object |
| create_storage | Create an object to store simulation results |
| create_storage_hcr | Create an object to store a hcr simulation results |
| do_assessment | Survey a population |
| est_recruits | Calculate recrutiment from previous years population |
| fishing_locs | Select fishing locations |
| F_to_catch | Calculates catch for a given F |
| init_k | Calculate the equilibrium population size |
| move_matrix | Create movement matrix |
| move_N | Move a fish population |
| multi_release | Multiple tag release estimate of population size |
| pars | Parameters for specifying multiple release tag model |
| petersen | Petersen estimators |
| print.srelease | Print method for single release, single recapture models |
| recruit_area | Assign recruitment proportions by area |
| run_hcr | Run a single-area simulation with a harvest control rule |
| run_sim | Run a simulation model |
| run_sim_multi_release | Run a simulation model |
| run_sim_multi_release_new_process_order | Run a simulation model |
| single_release | Single tag release estimate of population size |
| summary.bsamples | S3 method for bootstrapped confidence intervals |
| summary.mrsamples | S3 method for bootstrapped confidence intervals |
| summary.srelease | Summary method for single release, single recapture models |
| tagsim | tagsim: A simple population model for tag-based simulations |
