Files in BD2K-DDI/ddiR
ddiR: The Omics Discovery Index R package
.Rbuildignore
.github/workflows/rpackage.yml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/AllClasses.R
R/GenericFunctions.R
R/dataset.R
R/utils.R
R/zzz.R
README.md
ddiR.Rproj
inst/data/datasets-d.RData
inst/data/datasets-list.RData
inst/data/model_organism.tsv
inst/imgs/datasets-by-repository.png
inst/imgs/model-organism-omicsType-plot.png
inst/imgs/model-organism-plot.png
inst/imgs/simlars-correlation-50.png
inst/imgs/simlars-correlation.png
inst/scripts/construct_dataset_frame.R
inst/scripts/datasets_all_information.R
inst/scripts/datasets_similars.R
inst/scripts/model_organism_distribution.R
inst/scripts/query_all_datasets.R
man/DatasetDetail-class.Rd
man/DatasetResult-class.Rd
man/DatasetSimilars-class.Rd
man/DatasetSummary-class.Rd
man/DictWord-class.Rd
man/Facet-class.Rd
man/FacetValue-class.Rd
man/Item-class.Rd
man/LabMember-class.Rd
man/Organism-class.Rd
man/Protocol-class.Rd
man/PublicationDetail-class.Rd
man/PublicationResult-class.Rd
man/Similar-class.Rd
man/StatRecord-class.Rd
man/Term-class.Rd
man/database-DatasetDetail-method.Rd
man/database-DatasetSummary-method.Rd
man/dataset.id-DatasetDetail-method.Rd
man/dataset.id-DatasetSummary-method.Rd
man/dataset.to.dataframe.Rd
man/from.json.BiologicalSimilars.Rd
man/from.json.BiologicalSimilarsList.Rd
man/from.json.DataSetResult.Rd
man/from.json.DatasetDetail.Rd
man/from.json.DatasetResults.Rd
man/from.json.DatasetSummary.Rd
man/from.json.Facet.Rd
man/from.json.FacetValue.Rd
man/from.json.LabMember.Rd
man/from.json.Organism.Rd
man/from.json.Protocol.Rd
man/get.BiologicalSimilars.Rd
man/get.DatasetDetail.Rd
man/get.MetadataSimilars.Rd
man/get.dataset.link-DatasetDetail-method.Rd
man/get.dataset.name-DatasetDetail-method.Rd
man/get.dataset.omics-DatasetDetail-method.Rd
man/get.dataset.tissues-DatasetDetail-method.Rd
man/get.description-DatasetDetail-method.Rd
man/get.diseases-DatasetDetail-method.Rd
man/get.experiments.type-DatasetDetail-method.Rd
man/get.instruments-DatasetDetail-method.Rd
man/get.keywords-DatasetDetail-method.Rd
man/get.organisms-DatasetDetail-method.Rd
man/get.publication.date-DatasetDetail-method.Rd
man/get.publication.ids-DatasetDetail-method.Rd
man/list.to.data.frame.Rd
man/search.DatasetsSummary.Rd
tests/testthat.R
tests/testthat/testDatasetDetail.R
tests/testthat/testDatasetsSummary.R
