Man pages for BD2K-DDI/ddiR
ddiR: The Omics Discovery Index R package

database-DatasetDetail-methodReturns an acession id
database-DatasetSummary-methodReturns an acession id
DatasetDetail-classDatasetDetail provides the information about an specific...
dataset.id-DatasetDetail-methodReturns an acession id
dataset.id-DatasetSummary-methodReturns an acession id
DatasetResult-classDatasetResult, provides a list of datasets for an specific...
DatasetSimilars-classDatasetSimilars, This class contains the information of one...
DatasetSummary-classDatasetSummary, This class contains the information of one...
dataset.to.dataframeReturns a data frame from a DatasetDetail list
DictWord-classDictWord, This class contains the information of a list of...
Facet-classFacet provides the information about an specific Facet in the...
FacetValue-classFacetValue provides the information about an specific Facet...
from.json.BiologicalSimilarsfrom.json.BiologicalSimilars
from.json.BiologicalSimilarsListfrom.json.BiologicalSimilarsList
from.json.DatasetDetailfrom.json.DatasetDetail This function converts a json...
from.json.DataSetResultReturns a DatasetResult instance from a JSON string...
from.json.DatasetResultsfrom.json.DatasetResults
from.json.DatasetSummaryfrom.json.DatasetSummary
from.json.Facetfrom.json.Facet
from.json.FacetValuefrom.json.FacetValue
from.json.LabMemberfrom.json.LabMember
from.json.Organismfrom.json.Organism
from.json.Protocolfrom.json.Protocol This function converts a json Protocol...
get.BiologicalSimilarsget.BiologicalSimilars Returns a Biological Molecules...
get.DatasetDetailReturns a DatasetDetail from OmicsDI
get.dataset.link-DatasetDetail-methodReturns the dataset full link
get.dataset.name-DatasetDetail-methodReturns the original dataset title
get.dataset.omics-DatasetDetail-methodReturns the type of omics experiment (e.g. Proteomics,...
get.dataset.tissues-DatasetDetail-methodReturns tissues information described in the dataset
get.description-DatasetDetail-methodReturns the dataset description
get.diseases-DatasetDetail-methodReturns the diseases under study
get.experiments.type-DatasetDetail-methodReturns the experiments type described in the study
get.instruments-DatasetDetail-methodReturns the instruments used to generate the dataset
get.keywords-DatasetDetail-methodReturns the keywords described in the study
get.MetadataSimilarsget.MetadataSimilars
get.organisms-DatasetDetail-methodReturns the organisms described in the dataset
get.publication.date-DatasetDetail-methodReturns the dataset publication date
get.publication.ids-DatasetDetail-methodReturns the publications IDs associated to the dataset
Item-classItem, This class contains the information of an Item in the...
LabMember-classLabMember retrieve the information of a lab member including...
list.to.data.frameReturns a data frame from a list of objects
Organism-classOrganism return an organism entity including its name and...
Protocol-classProtocol retirve the information of a Protocol used in the...
PublicationDetail-classPublicationDetail, This class contains a Publication Record
PublicationResult-classPiublicationResult, This class contains a list of publication...
search.DatasetsSummarysearch.DatasetsSummary
Similar-classSimilar, This class contains the information of one particuar...
StatRecord-classStatRecord, This class contains the information of statistics...
Term-classTerm, This class contains the information of a Term
BD2K-DDI/ddiR documentation built on March 30, 2020, 11:38 p.m.