BKapili/ppit: Phylogenetic Placement for Inferring Taxonomy

Phylogenetic Placement for Inferring Taxonomy (PPIT) is an R package that infers microbial taxonomy from nifH amplicons using both phylogenetic and sequence identity approaches. For details, see Kapili & Dekas, in prep.

Getting started

Package details

Maintainer
LicenseGPL-3
Version1.2.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("BKapili/ppit")
BKapili/ppit documentation built on July 23, 2020, 1:52 a.m.