API for BMILAB/AStrap
Identificantion of alternative splicing events and classificaiton of alternative splicing types
| Global functions | |
|---|---|
| AStrap | Man page Source code |
| buildTrainModel | Man page Source code |
| chooseMethod | Source code |
| extract_IsoSeq_ge | Man page Source code |
| extract_IsoSeq_tr | Man page Source code |
| featureASCTD | Source code |
| featureASFrequency | Source code |
| featureAcceptorMotif | Source code |
| featureDonorMotif | Source code |
| featureGeLength | Source code |
| featureTHREE | Source code |
| getFeature | Man page Source code |
| getGeAltAsequence | Source code |
| getGeAltDsequence | Source code |
| getGeESsequence | Source code |
| getGeIRsequence | Source code |
| plotAS | Man page Source code |
| plotAlign | Man page Source code |
| plotCluster | Man page Source code |
| plotGain | Man page Source code |
| plotROC | Man page Source code |
| reCluster | Man page Source code |
| readCDHIT | Man page Source code |
| readGMAP | Man page Source code |
| trimmGMAP | Man page Source code |
