simpsonCoefficient: simpsonCoefficient
In Babulab-bioc/MSiP: 'MassSpectrometry' Interaction Prediction
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/simpsonCoefficient.R
Description
This function computes the Simpson similarity coefficient scores for
instances (e.g., bait-prey interactions (BPIs)) in the data.frame.
Usage
1
simpsonCoefficient(datInput)
Arguments
datInput
Data frame with column names: Experiment.id, Replicate, Bait,
Prey, and count (i.e., prey count).
Value
Data frame containing bait-prey pairs with Simpson coefficient,
a number between 0 and 1
Author(s)
Matineh Rahmatbakhsh, matinerb.94@gmail.com
Examples
1
2
3
data(SampleDatInput)
datScoring <- overlapScore(SampleDatInput)
head(datScoring)
Babulab-bioc/MSiP documentation built on Dec. 17, 2021, 9:52 a.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/simpsonCoefficient.R
Description
This function computes the Simpson similarity coefficient scores for instances (e.g., bait-prey interactions (BPIs)) in the data.frame.
Usage
1 | simpsonCoefficient(datInput)
|
Arguments
datInput |
Data frame with column names: Experiment.id, Replicate, Bait, Prey, and count (i.e., prey count). |
Value
Data frame containing bait-prey pairs with Simpson coefficient, a number between 0 and 1
Author(s)
Matineh Rahmatbakhsh, matinerb.94@gmail.com
Examples
1 2 3 | data(SampleDatInput)
datScoring <- overlapScore(SampleDatInput)
head(datScoring)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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