API for BaderLab/Tempora
Pathway-based Trajectory Inference for Time-series Single Cell RNA-Seq Data
| Global functions | |
|---|---|
| BuildTrajectory | Man page Source code |
| CalculatePWProfiles | Man page Source code |
| CreateTemporaObject | Man page Source code |
| IdentifyCellTypes | Man page Source code |
| IdentifyVaryingPWs | Man page Source code |
| ImportSeuratObject | Man page Source code |
| PlotTrajectory | Man page Source code |
| PlotVaryingPWs | Man page Source code |
| Tempora | Man page |
| Tempora-class | Man page |
| cluster.metadata | Man page |
| cluster.metadata,Tempora-method | Man page |
| cluster.metadata<- | Man page |
| cluster.metadata<-,Tempora-method | Man page |
| cluster.pathways | Man page |
| cluster.pathways,Tempora-method | Man page |
| cluster.pathways.dr | Man page |
| cluster.pathways.dr,Tempora-method | Man page |
| cluster.pathways.dr<- | Man page |
| cluster.pathways.dr<-,Tempora-method | Man page |
| cluster.pathways<- | Man page |
| cluster.pathways<-,Tempora-method | Man page |
| data | Man page |
| data,Tempora-method | Man page |
| data<- | Man page |
| data<-,Tempora-method | Man page |
| gams | Man page |
| gams,Tempora-method | Man page |
| gams<- | Man page |
| gams<-,Tempora-method | Man page |
| getExpr | Man page |
| getMD | Man page |
| layouts | Man page |
| layouts,Tempora-method | Man page |
| layouts<- | Man page |
| layouts<-,Tempora-method | Man page |
| meta.data | Man page |
| meta.data,Tempora-method | Man page |
| meta.data<- | Man page |
| meta.data<-,Tempora-method | Man page |
| n.pcs | Man page |
| n.pcs,Tempora-method | Man page |
| n.pcs<- | Man page |
| n.pcs<-,Tempora-method | Man page |
| trajectory | Man page |
| trajectory,Tempora-method | Man page |
| trajectory<- | Man page |
| trajectory<-,Tempora-method | Man page |
| varying.pws | Man page |
| varying.pws,Tempora-method | Man page |
| varying.pws<- | Man page |
| varying.pws<-,Tempora-method | Man page |
