databaseFileSize: Pre-compute the size of binding sites of each bed file in...

In Bao-Lab/GPSmatch: Compares and Ranks the Similarities of Bed Files

Description

The function compute the size of binding sites of each bed file in database and save the output(dataframe containing two columns:filename and binding size) into a ../database_dir_bindingsize.csv file

Usage

databaseFileSize(database_dir = database_dir, output_path = output_path)

Arguments

database_dir	directory path including the name of the database folder
output_path	directory path of the output file, save the output dataframe to .csv file(naming: "database_dir"_bindingsize.csv) into the user provided "output_path"

Examples

databaseFileSize(database_dir="/dir/database_dir", output_path="output_path" )

Bao-Lab/GPSmatch documentation built on Dec. 17, 2021, 10:45 a.m.