R/make_txi.R

In BarcUVa-Seq/FieldEffectCrc: Tumor, tumor-adjacent normal, and healthy colorectal transcriptomes as SummarizedExperiment objects

Defines functions make_txi

Documented in make_txi

make_txi <- function(se) {
    txi <- as.list(SummarizedExperiment::assays(se))
    txi$countsFromAbundance <- "no"
    return(txi)
}