impute: Title Impute This functions contains different imputation...

In BeanLabASU/metabimpute: Missingness Evaluation, Simulation and Imputation in Metabolomics

Title Impute This functions contains different imputation methods and imputes the data with all the different imputation methods

Description

Title Impute This functions contains different imputation methods and imputes the data with all the different imputation methods

Usage

Impute(data, method, local = TRUE, reps)

Arguments

data	data matrix with simulated data
method	the imputation method Note within replicate methods are preceded by 'R', eg 'RMIN' method=c('RF', 'BPCA', 'QRILC', 'GSIMP', 'RHM','RMEAN', 'RMEDIAN', 'RMIN','RZERO', 'RRF', 'RGSIMP', 'RQRILC','RBPCA','min','halfmin', 'mean', 'median', 'zero')
local	a boolean to determine if local rep_impute method is to be used, default to true.
reps	the number of replicate groups simulated data that doesn't require log preprocessing.

Value

results_data the matrix containing the imputed data

Examples

imputed_data <- impute(data=miss_data, methods=imputation_methods, local=T, reps=3)
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BeanLabASU/metabimpute documentation built on Feb. 5, 2023, 11:41 p.m.