swo_sim: replicate swo function and generate input sample sizes

In BenWilliams-NOAA/swo: Survey workload optimization

replicate swo function and generate input sample sizes

Description

replicate swo function and generate input sample sizes

Usage

swo_sim(
  iters = 1,
  lfreq_data,
  specimen_data,
  cpue_data,
  strata_data,
  yrs = NULL,
  strata = FALSE,
  boot_hauls = FALSE,
  boot_lengths = FALSE,
  boot_ages = FALSE,
  length_samples = NULL,
  age_samples = NULL,
  sexlen_samples = NULL,
  save = NULL,
  write_interm = FALSE,
  region = NULL
)

Arguments

iters	number of iterations (500 recommended)
lfreq_data	input dataframe
specimen_data	input dataframe
cpue_data	input dataframe
strata_data	input dataframe
yrs	any year filter >= (default = NULL)
strata	switch for regional or by strata (default = FALSE)
boot_hauls	resample hauls w/replacement (default = FALSE)
boot_lengths	resample lengths w/replacement (default = FALSE)
boot_ages	resample ages w/replacement (default = FALSE)
length_samples	sample size by length (default = NULL)
age_samples	proportion of sample size by age (default = NULL)
sexlen_samples	sample size by sex-length (default = NULL)
save	name to save a file
write_interm	save the intermediate age/length comps, the new "unsexed/unsampled" samples, and original length/age pop'n ests
region	region will create a folder and place results in said folder

Value

effective sample sizes and imput sample sizes

Examples

## Not run: 
swo_sim(iters=500, lfreq_data, specimen_data, cpue_data, strata_data, yrs = 2015,
                   strata = FALSE, boot_hauls = TRUE, boot_lengths = TRUE, boot_ages = FALSE,
                  length_samples = NULL, age_samples = NULL, sexlen_samples = NULL, save = "test", 
                   write_interm = FALSE, region = "goa")

## End(Not run)

BenWilliams-NOAA/swo documentation built on Sept. 11, 2023, 5:24 p.m.