Description Usage Arguments Details Value Author(s) References See Also
View source: R/bottleneckdist.R
Computing a pairwise distance matrix using a bottleneck distance method for the comparison of persistence barcodes.
1 | bottleneckdist(x, show.progress=FALSE)
|
x |
A list of persistence barcodes. Mandatory. |
show.progress |
A logical value. Should a progress bar be shown in the R console? Yes is TRUE, No is FALSE. |
The bottleneck distance between two persistence barcodes is calculated with the bottleneck
function of the TDA package (Fasy et al (2017)). An error message will be returned if TDA is not available.
show.progress=TRUE
can only be used if x
contains more than one element.
Returns a pairwise distance matrix.
Benjamin M. Delory
Fasy B.T., Kim J., Lecci F., Maria C., Millman D.L., Rouvreau V. (2018). TDA: Statistical Tools for Topological Data Analysis. https://CRAN.R-project.org/package=TDA.
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