phred_to_prob: Convert Phred Score to Probability
In Benji-Wagner/SequenceMapper: Map Reads to Reference Barcodes
Description
Usage
Arguments
Value
Description
phred_to_prob converts a series of phred scores,
which are ASCII characters used to encode the probabilities of a sequencing error for given base calls
in a sequence, to a vector of probability values.
phred_to_prob is called by calculate_probability.
Usage
1
phred_to_prob(phred_score)
Arguments
phred_score
A string of Phred scores. Each character is a representation of the probability that
the corresponding base call is an error.
Value
Returns a numeric vector of probabilities with length equal to the number of characters given in
phred_score
Benji-Wagner/SequenceMapper documentation built on June 6, 2019, 1:08 p.m.
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Description Usage Arguments Value
Description
phred_to_prob converts a series of phred scores,
which are ASCII characters used to encode the probabilities of a sequencing error for given base calls
in a sequence, to a vector of probability values.
phred_to_prob is called by calculate_probability.
Usage
1 | phred_to_prob(phred_score)
|
Arguments
phred_score |
A string of Phred scores. Each character is a representation of the probability that the corresponding base call is an error. |
Value
Returns a numeric vector of probabilities with length equal to the number of characters given in
phred_score
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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