GWAX: Perform GWAS with proxy information on family case-control...
In Best-Nicklas/Dataprojekt: Simulation and Analysis of Genetic Data
GWAX R Documentation
Perform GWAS with proxy information on family case-control status (GWAX)
Description
This function uses proxy information on case-control status along with genotype data to find the likelihood that
SNPs are causal. Information on parent case-control status must be included.
Usage
GWAX(rds.obj)
Arguments
rds.obj
A list object with an FBM.code256 and accompanying FAM and MAP tibbles. Must contain case-control status for
parents in FAM.
Value
A list containing GWAS data and a vector of proxy status for each genotype.
Best-Nicklas/Dataprojekt documentation built on June 7, 2022, 12:08 a.m.
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| GWAX | R Documentation |
Perform GWAS with proxy information on family case-control status (GWAX)
Description
This function uses proxy information on case-control status along with genotype data to find the likelihood that SNPs are causal. Information on parent case-control status must be included.
Usage
GWAX(rds.obj)
Arguments
rds.obj |
A list object with an FBM.code256 and accompanying FAM and MAP tibbles. Must contain case-control status for parents in FAM. |
Value
A list containing GWAS data and a vector of proxy status for each genotype.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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