Manhattan_plot: Make a Manhattan plot from analysis data
In Best-Nicklas/Dataprojekt: Simulation and Analysis of Genetic Data
View source: R/Manhattan_plot.R
Manhattan_plot R Documentation
Make a Manhattan plot from analysis data
Description
This function produces a Manhattan plot from P-values found in an association analysis.
Usage
Manhattan_plot(x, a)
Arguments
x
List object containing vector with numbering on SNPs and vector with P-values. Example could be GWAS data from analysis.
a
significance level used to determine whether SNPs are causal or not.
Value
A Manhattan plot with each regressor (SNP) on the x-axis and their -log10(P-values) on the y-axis.
Best-Nicklas/Dataprojekt documentation built on June 7, 2022, 12:08 a.m.
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View source: R/Manhattan_plot.R
| Manhattan_plot | R Documentation |
Make a Manhattan plot from analysis data
Description
This function produces a Manhattan plot from P-values found in an association analysis.
Usage
Manhattan_plot(x, a)
Arguments
x |
List object containing vector with numbering on SNPs and vector with P-values. Example could be GWAS data from analysis. |
a |
significance level used to determine whether SNPs are causal or not. |
Value
A Manhattan plot with each regressor (SNP) on the x-axis and their -log10(P-values) on the y-axis.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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