PlastoGram_P: PlastoGram_P model
In BioGenies/PlastoGram: Prediction of Subchloroplast localization
PlastoGram_P R Documentation
PlastoGram_P model
Description
PlastoGram model trained on the partitioning version
of the data sets. Its performance is slightly worse but it was
evaluated on sequences that were below 40
in regard to training sequences.
Format
A list of length four:
- ngram_models
Lower-level, task-specific ngram models
- RF_model
Higher-level random forest model that makes
final prediction based on results from lower-level models
- OM_IM_model
Additional model for differentiation of
proteins predicted as N_E into OM and IM
- imp_ngrams
list of informative ngrams for all models
BioGenies/PlastoGram documentation built on May 25, 2023, 10:45 p.m.
R Package Documentation
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| PlastoGram_P | R Documentation |
PlastoGram_P model
Description
PlastoGram model trained on the partitioning version of the data sets. Its performance is slightly worse but it was evaluated on sequences that were below 40 in regard to training sequences.
Format
A list of length four:
- ngram_models
Lower-level, task-specific ngram models
- RF_model
Higher-level random forest model that makes final prediction based on results from lower-level models
- OM_IM_model
Additional model for differentiation of proteins predicted as N_E into OM and IM
- imp_ngrams
list of informative ngrams for all models
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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