callbiomaRt: LONGO call biomaRt

In BioHPC/LONGO: Long gene expression as a metric for neuronal identity

LONGO call biomaRt

Description

This is a internal function. This function calls the biomaRt database to retrieve the gene symbols and lengths.

Usage

callbiomaRt(data.df, libraryType, ensembl)

Arguments

data.df	dataframe that contains the probe ids that will be checked
libraryType	the gene identifier of the data based off the biomaRt database
ensembl	BiomaRt mart based on the given species

Value

returns the data.df with two new columns, length and symbol

BioHPC/LONGO documentation built on Oct. 31, 2024, 4:43 a.m.