Files in BioHPC/megaR
An interactive R package for Metagenomic Data Analysis for Disease Prediction

DESCRIPTION
NAMESPACE
R/getgoodfea.R R/getleveldata.R R/glm.R R/megaRshiny.R R/plotconfumat.R R/plottopimptfeat.R R/prediction.R R/readdata.R R/saveplot.R R/svmmodeltrain.R R/training.R R/validation.R README.md
data/16S/Antibiotic/metadata_antibiotics.txt
data/16S/Antibiotic/otu_table.filtered.2Maaslin.txt
data/16S/T1D/diabimmune_t1d_16s_otu_table.biom.txt
data/16S/T1D/qiime_metadata.txt
data/16S/Three_country/qiime_metadata_three_country.txt
data/16S/Three_country/three_country_qiime.txt
data/WGS/Antibiotic/antibimetadata
data/WGS/Antibiotic/merged_metaphlan_antibiotic.txt
data/WGS/T1D/merged_metaphlan_t1d.txt
data/WGS/T1D/metadata.txt
data/WGS/Three_country/merged_three_country.txt
data/WGS/Three_country/metadata.csv
man/getGoodfeature.Rd man/getLevelData.Rd man/getconfuMat.Rd man/gettrainingdonesvm.Rd man/getunknpredict.Rd man/megaR.Rd man/plotimportantfeatures.Rd man/readmetadata.Rd man/savePlot.Rd man/validation.Rd
screenshot/Interface.png
screenshot/Prediction-02.png
screenshot/Preprocess_genus.png
screenshot/Preprocessing.png
screenshot/Test_error_statistics.png
screenshot/Toptenfeature_plot.png
screenshot/Train_error_plot.png
screenshot/Train_stats.png
screenshot/data_input.png
screenshot/test_error.png
screenshot/validation.png
BioHPC/megaR documentation built on May 14, 2019, 12:51 a.m.