obo_relations: Functions to display relationships of an 'OBOSet' object
In Bioconductor/BiocSet: Representing Different Biological Sets

obo_relations

R Documentation

Functions to display relationships of an `OBOSet` object

Description

These functions will display the relationships (children, parents, or ancestors) for either the elements or the sets of an OBOSet object.

Usage

oboset_element_children(oboset)

oboset_element_parents(oboset)

oboset_element_ancestors(oboset)

oboset_set_children(oboset)

oboset_set_parents(oboset)

oboset_set_ancestors(oboset)

Arguments

oboset

The OBOSet of interest.

Value

A 2 column tibble.

Examples

oboFile <- system.file("extdata", "sample_go.obo", package = "BiocSet")
obo <- import(oboFile)
oboset_element_children(obo) 

oboset_element_parents(obo)

oboset_element_ancestors(obo)

oboset_set_children(obo)

oboset_set_parents(obo)

oboset_set_ancestors(obo)

Bioconductor/BiocSet documentation built on Oct. 31, 2024, 11:43 p.m.