Bioconductor/GDSArray: Representing GDS files as array-like objects

GDS files are widely used to represent genotyping or sequence data. The GDSArray package implements the `GDSArray` class to represent nodes in GDS files in a matrix-like representation that allows easy manipulation (e.g., subsetting, mathematical transformation) in _R_. The data remains on disk until needed, so that very large files can be processed.

Getting started

Package details

Bioconductor views DataRepresentation GenotypingArray Infrastructure Sequencing
Maintainer
LicenseGPL-3
Version1.27.0
URL https://github.com/Bioconductor/GDSArray
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("Bioconductor/GDSArray")
Bioconductor/GDSArray documentation built on Nov. 2, 2024, 9:57 p.m.