README.md

In Bioconductor/MultiOmicQC: Quality control for Multi-omics datasets

MultiOmicQC

Genomic annotation matching

Given two or more datasets on genomic intervals or with genomic build information:

Simple sanity checks

• [ ] Check seqlevels match (and report mismatches)
• [ ] Check seqnames match (and report mismatches)
• [ ] Check seqlengths (or max seqlengths)

Sample level checks

• [ ] Gender prediction
• [ ] Population prediction (genetic data)

Dataset-level checks

• [ ] Sample correlations
• [ ] General outlier discovery in matrix-like data

Bioconductor/MultiOmicQC documentation built on May 22, 2019, 12:59 p.m.