Bioconductor/hca: Exploring the Human Cell Atlas Data Coordinating Platform

This package provides users with the ability to query the Human Cell Atlas data repository for single-cell experiment data. The `projects()`, `files()`, `samples()` and `bundles()` functions retrieve summary information on each of these indexes; corresponding `*_details()` are available for individual entries of each index. File-based resources can be downloaded using `files_download()`. Advanced use of the package allows the user to page through large result sets, and to flexibly query the 'list-of-lists' structure representing query responses.

Getting started

Package details

Bioconductor views SingleCell Software
Maintainer
LicenseMIT + file LICENSE
Version1.5.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("Bioconductor/hca")
Bioconductor/hca documentation built on April 27, 2022, 9:06 p.m.