Herm-int: Internal Herm functions

In Blue-Matter/MSEtool: Management Strategy Evaluation Toolkit

Internal Herm functions

Description

• expandHerm expands the Herm list in SexPars to a matrix of fractions at age

• checkHerm checks that each array in the list has dimension nsim x maxage+1 x nyears + proyears. For backwards compatibility, also converts matrices to arrays by adding the year dimension.

• subsetHerm returns year-specific Herm values.

Usage

expandHerm(Herm, maxage, np, nsim)

checkHerm(Herm, maxage, nsim, nyears, proyears)

subsetHerm(Herm, y)

Arguments

Herm	A list of Hermaphroditic fractions at age
maxage	The maximum age of stocks being simulated
np	The total number of stocks being simulated
nsim	The number of simulations
nyears	The number of historical years
proyears	The number of projection years
y	The year to subset

Author(s)

T. Carruthers

Q. Huynh

Blue-Matter/MSEtool documentation built on Nov. 7, 2024, 11:38 p.m.