optYield: Optimize yield for a single simulation
In Blue-Matter/MSEtool: Management Strategy Evaluation Toolkit

optYield

R Documentation

Optimize yield for a single simulation

Description

Optimize yield for a single simulation

Usage

optYield(
  logFa,
  Asize_c,
  nareas,
  maxage,
  Ncurr,
  pyears,
  M_age,
  MatAge,
  WtAge,
  FecAge,
  WtAgeC,
  Vuln,
  Retc,
  Prec,
  movc,
  SRrelc,
  Effind,
  Spat_targc,
  hc,
  R0c,
  SSBpRc,
  aRc,
  bRc,
  Qc,
  MPA,
  maxF,
  SSB0c,
  plusgroup = 0,
  SRRfun,
  SRRpars,
  spawn_time_frac = 0
)

Arguments

`logFa`	log apical fishing mortality
`Asize_c`	A vector of length areas with relative size of areas
`nareas`	Number of area
`maxage`	Maximum age
`Ncurr`	Current N-at-age
`pyears`	Number of projection years
`M_age`	M-at-age
`MatAge`	Maturity-at-age
`WtAge`	Weight-at-age (stock)
`FecAge`	Mature-weight-at-age
`WtAgeC`	Weight-at-age (fishery)
`Vuln`	Vulnerability-at-age
`Retc`	Retention-at-age
`Prec`	Recruitment error
`movc`	Movement matrix
`SRrelc`	SR Relationship
`Effind`	Historical effort
`Spat_targc`	Spatial targeting
`hc`	Steepness
`R0c`	Unfished recruitment by area
`SSBpRc`	Unfished spawning stock per recruit by area
`aRc`	Ricker aR
`bRc`	Ricker bR
`Qc`	Catchability
`MPA`	A matrix of spatial closures by year
`maxF`	A numeric value specifying the maximum fishing mortality for any single age class
`SSB0c`	SSB0
`plusgroup`	Integer. Default = 0 = no plus-group. Use 1 to include a plus-group
`spawn_time_frac`	Numeric. Fraction of the year when spawning occurs. Default = 0.