quantile_plot: A quantile plot

In Blue-Matter/MSEtool: Management Strategy Evaluation Toolkit

A quantile plot

Description

Plots quantiles and simulations for a stochastic time-series variable

Usage

quantile_plot(
  datmat,
  xvals,
  p = c(0.05, 0.25, 0.5, 0.75, 0.95),
  tcol,
  ylim,
  sims = 1:3,
  refline = NA,
  dox = F,
  doy = F
)

Arguments

datmat	Matrix of real values with dimensions (simulation, year) (e.g. SB/SBMSY)
xvals	Vector of numerical values of length ncol(datmat). The xaxis labels for datmat.
p	Vector of quantiles five positions long. Defaults to c(0.05,0.25,0.5,0.75,0.95) so the 90% and 50% intervals with the median plotted in white.
tcol	Color of shaded regions (transparent)
ylim	Numerical vector of length 2, lower and upper limits for the yaxis
sims	Vector of positive integers, the individual simulations to plot
refline	Positive real number, a reference line to plot (on scale of y axis)
dox	Logical, should the x axis labels be plotted.
doy	Logical, should the y axis labels be plotted.

Author(s)

T. Carruthers

Blue-Matter/MSEtool documentation built on Nov. 22, 2024, 8:23 p.m.