Man pages for BrianLohman/SingleCellGarage
A collection of utilities to make working with (and combining) existing single cell packages easier
| build_10x_atac | Read in multiple 10X ATAC samples with Signac and merge with... |
| build_manifest | Build file manifest from 10X cellranger-atac |
| export_umap | Export UMAP embeddings from a Suerat object |
| loupe_mouse_to_human | Convert Loupe differential gene expression results from mouse... |
| percent_table | Convert a counts table to fraction of total observations |
| prep_sc_DE_for_fgsea | Covert the ouptut of Seurat's FindMarkers to a table that... |
| read10X_multiple | Read in multiple 10X scRNAsea samples |
