Intercept-class: 'Intercept' Class Definition

In BussemakerLab/SelexGLM: Functions for performing feature-based analyis of SELEX-seq data using generalized linear models

Description

An S4 class to represent intercept features, including round-, view-, and strand-specific intercept contributions.

Slots

I.values

3-D array of beta values with entries corresponding to (Strand)x(View)x(Round) intercept values.

I.errors

3-D array of errors for I.values.

I.z

3-D array of Z-scores for I.values.

I.sig

3-D array of p-values for I.values.

I.oldValues

4-D array for storing previous iteration values beta values for I.values where each entry corresponds to (Strand)x(View)x(Round)x(Iteration).

I.oldErrors

4-D array of previous iteration I.errors.

I.oldZ

4-D array of previous iteration I.z.

I.oldSig

4-D array of previous iteration I.sig.

BussemakerLab/SelexGLM documentation built on May 17, 2019, 5:41 p.m.