plotPSAMComp.Ratios: Dot plot of ratios between nucleotide psams from 2 objects of...

In BussemakerLab/SelexGLM: Functions for performing feature-based analyis of SELEX-seq data using generalized linear models

Description

Returns standardized PSAM plot of ratios between two model objects' nucleotide affinities.

Usage

plotPSAMComp.Ratios(model1, model2, title = "", yTitle = "", maxErr = 1,
  iter = NULL, regs = NULL, lengths = NULL)

Arguments

model1	Model1 from which to take first set of nucleotide feature values.
model2	Model2 from which to take first set of nucleotide feature values.
title	Title for plot.
maxErr	Maximum height of error bars to use in plotting.
iter	Iteration of model to use for mono nucleotide values.
regs	Optional parameter giving labels to use for region shading. If used, lengths parameter must also be specified.
lengths	Length of region parameters to be included.

BussemakerLab/SelexGLM documentation built on May 17, 2019, 5:41 p.m.