scoreKmers: Score K-mer Sequences

Description Usage Arguments

Description

Scores Kmers using model beta values for all feature parameters estimated with regression.

Usage

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scoreKmers(data, model, l.index, PSAMcol = "PredictedAffinity",
  seqCol = "Kmer")

Arguments

data

Table of k-mers.

model

Object of class model.

l.index

Left-most position of PSAM to be used for scoring,

PSAMcol

Name for PSAM affinity column.

seqCol

Name for k-mer variable to be scored.


BussemakerLab/SelexGLM documentation built on May 17, 2019, 5:41 p.m.