Files in CAMO-R/Rpackage
Perform cross-species resemblance analysis
.Rbuildignore
.gitignore
CAMO.Rproj
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/ACS_ADS_DE.R
R/CAMO-package.R
R/KEGG_module.R
R/KEGG_module_topology_plot.R
R/RcppExports.R
R/bayes.R
R/ha.R
R/ha.group.R
R/hb.R
R/hb.group.R
R/hi.R
R/hi.group.R
R/hl.R
R/hl.group.R
R/hs.R
R/hs.group.R
R/ht.R
R/ht.group.R
R/indDE.R
R/internal.R
R/ma.R
R/ma.group.R
R/mb.R
R/mb.group.R
R/mdsGlobal.R
R/merge.R
R/mi.R
R/mi.group.R
R/ml.R
R/ml.group.R
R/ms.R
R/ms.group.R
R/mt.R
R/mt.group.R
R/multiOutput.R
R/multi_ACS_ADS_global.R
R/multi_ACS_ADS_pathway.R
R/pathwaySelect.R
R/readData.R
README.md
data/Seqname2Entrez_ce.RData
data/Seqname2Publicname_ce.RData
data/biocarta.pathway.list_hsa.RData
data/cd_orth.RData
data/ce_dau.RData
data/ce_dm_orth.RData
data/ce_e0.RData
data/ce_e1.RData
data/ce_e2.RData
data/ce_lar.RData
data/dm_e0.RData
data/dm_e1.RData
data/dm_e2.RData
data/dm_lar.RData
data/dm_pup.RData
data/full.pathway.list.RData
data/go.pathway.list_hsa.RData
data/ha.group.rda
data/ha.rda
data/hashtb_cel.rda
data/hashtb_dme.rda
data/hashtb_hsa.rda
data/hashtb_mmu.rda
data/hashtb_rno.rda
data/hb.group.rda
data/hb.rda
data/hf_orth.RData
data/hi.group.rda
data/hi.rda
data/hl.group.rda
data/hl.rda
data/hm_orth.RData
data/hr_orth.RData
data/hs.group.rda
data/hs.rda
data/hs_ce_orth.RData
data/hs_dm_orth.RData
data/hs_mm_orth.RData
data/hs_rn_orth.RData
data/ht.group.rda
data/ht.rda
data/human.pathway.list.RData
data/hw_orth.RData
data/kegg.pathway.list_cel.RData
data/kegg.pathway.list_cel_GeneNames.RData
data/kegg.pathway.list_dme.RData
data/kegg.pathway.list_hsa.RData
data/kegg.pathway.list_mmu.RData
data/kegg.pathway.list_rno.RData
data/ma.group.rda
data/ma.rda
data/mb.group.rda
data/mb.rda
data/mi.group.rda
data/mi.rda
data/ml.group.rda
data/ml.rda
data/ms.group.rda
data/ms.rda
data/mt.group.rda
data/mt.rda
data/pid.pathway.list_hsa.RData
data/reactome.pathway.list_cel.RData
data/reactome.pathway.list_cel_GeneNames.RData
data/reactome.pathway.list_dme.RData
data/reactome.pathway.list_hsa.RData
data/reactome.pathway.list_mmu.RData
data/reactome.pathway.list_rno.RData
data/wiki.pathway.list_hsa.RData
data/worm.pathway.list.RData
inst/ImageProcess.py
inst/pallete.jpeg
man/ACS_ADS_DE_plot.Rd
man/KEGG_module.Rd
man/KEGG_module_topology_plot.Rd
man/bayes.Rd
man/ha.Rd
man/ha.group.Rd
man/hb.Rd
man/hb.group.Rd
man/hi.Rd
man/hi.group.Rd
man/hl.Rd
man/hl.group.Rd
man/hs.Rd
man/hs.group.Rd
man/ht.Rd
man/ht.group.Rd
man/indDE.Rd
man/ma.Rd
man/ma.group.Rd
man/mb.Rd
man/mb.group.Rd
man/mdsGlobal.Rd
man/merge.Rd
man/mi.Rd
man/mi.group.Rd
man/ml.Rd
man/ml.group.Rd
man/ms.Rd
man/ms.group.Rd
man/mt.Rd
man/mt.group.Rd
man/multiOutput.Rd
man/multi_ACS_ADS_global.Rd
man/multi_ACS_ADS_pathway.Rd
man/pathSelect.Rd
man/read.groupData.Rd
man/read.pData.Rd
man/read.rawData.Rd
src/.gitignore
src/ACS.cpp
src/ADS.cpp
src/BayesP.cpp
src/Makevars
src/Makevars.win
src/RcppExports.cpp
vignettes/.gitignore
vignettes/CAMO.Rmd
vignettes/CAMO.html
vignettes/CAMO_workflow.png
