WGCNA_6_3: Step 3: determing module size for WGCNA

In CBIIT-CGBB/OmicPath: OmicPath

Step 3: determing module size for WGCNA

Description

Step 3: determing module size for WGCNA

Usage

  WGCNA_6_3(expr=expr, softPower=8, minM=minM, cutH=cutH, stype="unsigned", project.name="WGCNA_net");

Arguments

expr	expr: gene expression data
softPower	softPower: power value from step 2
minM	minM: minimum node number per module
cutH	cutH: threshold for module selecting
stype	stype: unsigned, signed, signed hybrid, distance
project.name	project.name: project name

Author(s)

Ying Hu <[e-mail]> Chunhua Yan <[e-mail]>

References

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Examples

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CBIIT-CGBB/OmicPath documentation built on Sept. 27, 2024, 4:53 a.m.